get.genocol: Generate a set of genotype (dosage) colors for XY-plots
In fitPoly: Genotype Calling for Bi-Allelic Marker Assays
get.genocol R Documentation
Generate a set of genotype (dosage) colors for XY-plots
Description
For each of the dosages 0 to ploidy a color is generated,
and an additional one for samples with no dosage assigned.
Usage
get.genocol(ploidy, pastel=TRUE)
Arguments
ploidy
any ploidy level >= 2
pastel
if TRUE (default) light (pastel) colors are generated, else more
intense colors
Details
the colors range from red (first item, dosage 0) via blue
(dosage ploidy/2) to green (dosage ploidy); the color for missing dosage is
grey
Value
A vector of <ploidy + 2> color values; items 1 .. ploidy+1 for
dosage 0 .. ploidy and item ploidy+2 for missing dosages
fitPoly documentation built on April 3, 2025, 8:58 p.m.
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| get.genocol | R Documentation |
Generate a set of genotype (dosage) colors for XY-plots
Description
For each of the dosages 0 to ploidy a color is generated, and an additional one for samples with no dosage assigned.
Usage
get.genocol(ploidy, pastel=TRUE)
Arguments
ploidy |
any ploidy level >= 2 |
pastel |
if TRUE (default) light (pastel) colors are generated, else more intense colors |
Details
the colors range from red (first item, dosage 0) via blue (dosage ploidy/2) to green (dosage ploidy); the color for missing dosage is grey
Value
A vector of <ploidy + 2> color values; items 1 .. ploidy+1 for dosage 0 .. ploidy and item ploidy+2 for missing dosages
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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