mri_convert: Use Freesurfers MRI Converter
In freesurfer: Wrapper Functions for 'Freesurfer'

mri_convert

R Documentation

Use Freesurfers MRI Converter

Description

This function calls mri_convert to convert an image

Usage

mri_convert(file, outfile, opts = "", ...)

Arguments

`file`	(character) input filename
`outfile`	(character) output filename
`opts`	(character) additional options to `mri_convert`
`...`	Additional arguments to pass to `fs_cmd`

Value

Result of system command

Examples

if (have_fs() && requireNamespace("oro.nifti", quietly = TRUE)) {
   img = oro.nifti::nifti(array(rnorm(5*5*5), dim = c(5,5,5)))
   res = mri_convert(img, outfile = tempfile(fileext = ".mgz"))
}

freesurfer documentation built on June 8, 2025, 10:17 a.m.