reverse_rpi_orient: Reverse Reorientation an Image to RPI orientation

In fslr: Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

Reverse Reorientation an Image to RPI orientation

Description

This function uses fslswapdim to reorient an image

Usage

reverse_rpi_orient(
  file,
  convention = c("NEUROLOGICAL", "RADIOLOGICAL"),
  orientation,
  verbose = TRUE
)

reverse_rpi_orient_file(
  file,
  convention = c("NEUROLOGICAL", "RADIOLOGICAL"),
  orientation,
  verbose = TRUE
)

Arguments

file	Object of class nifti or character path
convention	Convention of original image (usually from rpi_orient)
orientation	Vector of length 3 from original image (usually from rpi_orient)
verbose	print diagnostic messages

Value

Object of class nifti

fslr documentation built on May 29, 2024, 2:31 a.m.