distanceImportanceNetwork.BigBang: Converts geneImportanceNetwork matrix to distance matrix

In galgo: Genetic Algorithms for Multivariate Statistical Models from Large-Scale Functional Genomics Data

Description

Converts geneImportanceNetwork matrix to distance matrix.

Usage

## S3 method for class 'BigBang'
distanceImportanceNetwork(o, gin=NULL, ...)

Arguments

gin	The geneImportanceNetwork matrix. If it is not provided, a default call to geneImportanceNetwork will be performed.
...	Parameters for geneImportanceNetwork when gin is not provided.

Value

Returns a matrix representing gene distances.

Author(s)

Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K. http://www.bip.bham.ac.uk/bioinf

References

Goldberg, David E. 1989 Genetic Algorithms in Search, Optimization and Machine Learning. Addison-Wesley Pub. Co. ISBN: 0201157675

See Also

For more information see BigBang. *geneImportanceNetwork().

Examples

## Not run: 
   #bb is a BigBang object
   bb
   gin <- geneImportanceNetwork(bb)
   din <- distanceImportanceNetwork(bb, gin)
   
## End(Not run)
 

galgo documentation built on May 2, 2019, 4:20 a.m.