crossover.Niche: Performs crossover between chromosomes of the niche

In galgo: Genetic Algorithms for Multivariate Statistical Models from Large-Scale Functional Genomics Data

Description

Perform crossover between chromosomes of the niche. This method is called inside progeny method.

Usage

## S3 method for class 'Niche'
crossover(ni, n=(ni$crossoverFunc)(ni), ...)

Arguments

n	Number of crossover to perform. The default is obtained calling crossoverFunc.

Value

Returns the “males” and “females” chromosomes used to crossover.

Author(s)

Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K. http://www.bip.bham.ac.uk/bioinf

References

Goldberg, David E. 1989 Genetic Algorithms in Search, Optimization and Machine Learning. Addison-Wesley Pub. Co. ISBN: 0201157675

See Also

For more information see Niche. *progeny().

Examples

  cr <- Chromosome(genes=newCollection(Gene(shape1=1, shape2=100),5))
  cr
  ni <- Niche(chromosomes = newRandomCollection(cr, 10))
  ni
  crossover(ni)
  ni

galgo documentation built on May 2, 2019, 4:20 a.m.