fitness: Function used to evaluate a chromosome

In galgo: Genetic Algorithms for Multivariate Statistical Models from Large-Scale Functional Genomics Data

Description

Function used to evaluate a chromosome using training and validation sets (second-level training-test sets) and the selected split.

Usage

fitness(chr, parent)

Arguments

chr	Chromosome or vector object.
parent	Parent object, commonly BigBang object.

Value

A numeric value with the fitness computed for the chromosome.

Note

This function is designed to be used under configBB.VarSel configuration and depend on splitTrainKFold and splitValidKFold variables.

Author(s)

Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K.

See Also

forwardSelectionModels.BigBang, modelSelection, classPrediction, configBB.VarSel

galgo documentation built on May 2, 2019, 4:20 a.m.