demo: GWAS p_values demo data

In genomicper: Circular Genomic Permutation using Genome Wide Association p-Values

Description

GWAS p-values (tab delimited file). First Column must contain the SNP ids and the column name = "name"

Usage

data(demo)

Format

A data frame with SNPs identifiers and gwas p-values of association

name

a character vector

Trait1

a numeric vector

Trait2

a numeric vector

Trait3

a numeric vector

Trait4

a numeric vector

Trait5

a numeric vector

Trait6

a numeric vector

Trait7

a numeric vector

Trait8

a numeric vector

Trait9

a numeric vector

	name       Trait1      Trait2    Trait3   Trait4 	Trait5    Trait6
	rs10000010 0.9122360 0.30088096 0.2332038 0.5193068 0.1255104 0.07253145 
	rs10000023 0.8642906 0.52064064 0.9243443 0.7177759 0.9512171 0.81716250 
	rs10000030 0.2832705 0.99021664 0.8359339 0.9662707 0.8491221 0.50208681 

  

Examples

#Read input demo file for "read_pvals" function
data(demo)

genomicper documentation built on May 8, 2021, 9:06 a.m.