hyprbg: Hypergeometric Test (phyper)
In genomicper: Circular Genomic Permutation using Genome Wide Association p-Values
Description
Usage
Arguments
Value
References
Description
Performs Hypergeometric test (phyper() from R)
Usage
1
hyprbg(Sig_in_Paths, uniSig, gns_in_Paths, universe)
Arguments
Sig_in_Paths
Number of significant genes in the pathway
uniSig
Number of significant genes in the dataset
gns_in_Paths
Number of genes in the pathway
universe
Number of genes in the dataset
Value
Returns hypergeometric test
References
hyprbg Imports phyper() (from stats)
genomicper documentation built on May 8, 2021, 9:06 a.m.
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Description Usage Arguments Value References
Description
Performs Hypergeometric test (phyper() from R)
Usage
1 | hyprbg(Sig_in_Paths, uniSig, gns_in_Paths, universe)
|
Arguments
Sig_in_Paths |
Number of significant genes in the pathway |
uniSig |
Number of significant genes in the dataset |
gns_in_Paths |
Number of genes in the pathway |
universe |
Number of genes in the dataset |
Value
Returns hypergeometric test
References
hyprbg Imports phyper() (from stats)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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