ggRandomForests: Visually Exploring Random Forests

Graphic elements for exploring Random Forests using the 'randomForest' or 'randomForestSRC' package for survival, regression and classification forests and 'ggplot2' package plotting.

AuthorJohn Ehrlinger <john.ehrlinger@gmail.com>
Date of publication2016-09-07 23:21:30
MaintainerJohn Ehrlinger <john.ehrlinger@gmail.com>
LicenseGPL (>= 3)
Version2.0.1
https://github.com/ehrlinger/ggRandomForests

View on CRAN

Man pages

cache_rfsrc_datasets: Recreate the cached data sets for the ggRandomForests package

calc_auc: Area Under the ROC Curve calculator

calc_roc.rfsrc: Reciever Operator Characteristic calculator

combine.gg_partial: combine two gg_partial objects

gg_error: randomForestSRC error rate data object

gg_interaction: Minimal Depth Variable Interaction data object...

gg_minimal_depth: Minimal depth data object ('[randomForestSRC]{var.select}')

gg_minimal_vimp: Minimal depth vs VIMP camparison by variable rankings.

gg_partial: Partial variable dependence object

gg_partial_coplot.rfsrc: Data structures for stratified partial coplots

ggRandomForests-package: ggRandomForests: Visually Exploring Random Forests

gg_rfsrc.rfsrc: Predicted response data object

gg_roc.rfsrc: ROC (Receiver operator curve) data from a classification...

gg_survival: Nonparametric survival estimates.

gg_variable: Marginal variable depedance data object.

gg_vimp: Variable Importance (VIMP) data object

kaplan: nonparametric kaplan-meier estimates

logit_loess: logit_loess takes

nelson: nonparametric Nelson-Aalen estimates

partial.rfsrc: randomForestSRC partial dependence (data object) (modified...

plot.gg_error: Plot a 'gg_error' object

plot.gg_interaction: plot.gg_interaction Plot a 'gg_interaction' object,

plot.gg_minimal_depth: Plot a 'gg_minimal_depth' object for random forest variable...

plot.gg_minimal_vimp: Plot a 'gg_minimal_vimp' object for comparing the Minimal...

plot.gg_partial: Partial variable dependence plot, operates on a 'gg_partial'...

plot.gg_partial_list: Partial variable dependence plot, operates on a...

plot.gg_rfsrc: Predicted response plot from a 'gg_rfsrc' object.

plot.gg_roc: ROC plot generic function for a 'gg_roc' object.

plot.gg_survival: Plot a 'gg_survival' object.

plot.gg_variable: Plot a 'gg_variable' object,

plot.gg_vimp: Plot a 'gg_vimp' object, extracted variable importance of a...

print.gg_minimal_depth: Print a 'gg_minimal_depth' object.

quantile_pts: Find points evenly distributed along the vectors values.

shift: lead function to shift by one (or more).

surface_matrix: Construct a set of (x, y, z) matrices for surface plotting a...

Files in this package

ggRandomForests
ggRandomForests/NAMESPACE
ggRandomForests/NEWS
ggRandomForests/R
ggRandomForests/R/plot.gg_minimal_vimp.R ggRandomForests/R/gg_variable.R ggRandomForests/R/plot.gg_rfsrc.R ggRandomForests/R/gg_error.R ggRandomForests/R/quantile_pts.R ggRandomForests/R/logit_loess.R ggRandomForests/R/plot.gg_vimp.R ggRandomForests/R/gg_vimp.R ggRandomForests/R/gg_minimal_depth.R ggRandomForests/R/calc_roc.R ggRandomForests/R/plot.gg_partial.R ggRandomForests/R/plot.gg_minimal_depth.R ggRandomForests/R/plot.gg_survival.R ggRandomForests/R/gg_interaction.R ggRandomForests/R/partial.rfsrc.R ggRandomForests/R/plot.gg_variable.R ggRandomForests/R/cache_rfsrc_datasets.R ggRandomForests/R/gg_survival.R ggRandomForests/R/plot.gg_partial_list.R ggRandomForests/R/plot.gg_error.R ggRandomForests/R/gg_minimal_vimp.R ggRandomForests/R/nelson.R ggRandomForests/R/plot.gg_interaction.R ggRandomForests/R/combine.gg_partial.R ggRandomForests/R/help.R ggRandomForests/R/print.gg_minimal_depth.R ggRandomForests/R/plot.gg_roc.R ggRandomForests/R/kaplan.R ggRandomForests/R/surface_matrix.gg_partial_coplot.R ggRandomForests/R/gg_partial.R ggRandomForests/R/gg_roc.R ggRandomForests/R/gg_rfsrc.R ggRandomForests/R/gg_partial_coplot.R
ggRandomForests/README.md
ggRandomForests/MD5
ggRandomForests/DESCRIPTION
ggRandomForests/man
ggRandomForests/man/plot.gg_roc.Rd ggRandomForests/man/gg_roc.rfsrc.Rd ggRandomForests/man/kaplan.Rd ggRandomForests/man/quantile_pts.Rd ggRandomForests/man/print.gg_minimal_depth.Rd ggRandomForests/man/shift.Rd ggRandomForests/man/gg_error.Rd ggRandomForests/man/calc_roc.rfsrc.Rd ggRandomForests/man/logit_loess.Rd ggRandomForests/man/gg_survival.Rd ggRandomForests/man/plot.gg_rfsrc.Rd ggRandomForests/man/ggRandomForests-package.Rd ggRandomForests/man/gg_interaction.Rd ggRandomForests/man/partial.rfsrc.Rd ggRandomForests/man/gg_partial.Rd ggRandomForests/man/gg_partial_coplot.rfsrc.Rd ggRandomForests/man/cache_rfsrc_datasets.Rd ggRandomForests/man/calc_auc.Rd ggRandomForests/man/nelson.Rd ggRandomForests/man/surface_matrix.Rd ggRandomForests/man/plot.gg_minimal_depth.Rd ggRandomForests/man/plot.gg_error.Rd ggRandomForests/man/combine.gg_partial.Rd ggRandomForests/man/gg_minimal_depth.Rd ggRandomForests/man/plot.gg_interaction.Rd ggRandomForests/man/plot.gg_minimal_vimp.Rd ggRandomForests/man/gg_variable.Rd ggRandomForests/man/plot.gg_variable.Rd ggRandomForests/man/plot.gg_survival.Rd ggRandomForests/man/gg_vimp.Rd ggRandomForests/man/plot.gg_partial_list.Rd ggRandomForests/man/gg_rfsrc.rfsrc.Rd ggRandomForests/man/gg_minimal_vimp.Rd ggRandomForests/man/plot.gg_partial.Rd ggRandomForests/man/plot.gg_vimp.Rd
ggRandomForests/.Rinstignore

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