Man pages for ggmsa
Plot Multiple Sequence Alignment using 'ggplot2'
| available_colors | List Color Schemes currently available |
| available_fonts | List Font Families currently available |
| available_msa | List MSA objects currently available |
| color_Clustal | A color scheme of Culstal. The algorithm to assign colors for... |
| color_scheme | Assigning colors to sequence alignment. |
| facet_msa | segment MSA |
| geom_GC | geom_GC |
| geom_helix | geom_helix |
| geom_msa | geom_msa |
| geom_msaBar | geom_msaBar |
| geom_seed | geom_seed |
| geom_seqlogo | geom_seqlogo |
| get_consensus | calling the consensus sequence. |
| gghelix | gghelix |
| ggmsa | ggmsa |
| ggSeqBundle | ggSeqBundle |
| msa2tidy | This function converts the msa_data to the tidy data. |
| plot-methods | plot method for SeqDiff object |
| readSSfile | readSSfile |
| seqdiff | seqdiff |
| seqlogo | seqlogo |
| show-methods | show method |
| simplot | simplot |
| tidy_color | cleaning the needless sequeces' color according to the... |
| tidy_msa | tidy_msa |
