tidy_color: cleaning the needless sequeces' color according to the...

Description Usage Arguments

View source: R/cons.R

Description

cleaning the needless sequeces' color according to the consensus sequcence (only used in the consensus views).

Usage

1
tidy_color(y, consensus, disagreement, ref)

Arguments

y

a data frame, sequence alignment with specified color.

consensus

the consensus sequence which can be called by get_consensus().

disagreement

a logical value. Displays characters that disagreememt to consensus(excludes ambiguous disagreements).

ref

a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE.


ggmsa documentation built on Feb. 2, 2021, 5:14 p.m.