tidy_color: cleaning the needless sequeces' color according to the...
In ggmsa: Plot Multiple Sequence Alignment using 'ggplot2'
Description
cleaning the needless sequeces' color according to the consensus sequcence (only used in the consensus views).
Usage
1
tidy_color(y, consensus, disagreement, ref)
Arguments
y
a data frame, sequence alignment with specified color.
consensus
the consensus sequence which can be called by get_consensus().
disagreement
a logical value. Displays characters that disagreememt to consensus(excludes ambiguous disagreements).
ref
a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE.
ggmsa documentation built on Aug. 3, 2021, 9:06 a.m.
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Description
cleaning the needless sequeces' color according to the consensus sequcence (only used in the consensus views).
Usage
1 | tidy_color(y, consensus, disagreement, ref)
|
Arguments
y |
a data frame, sequence alignment with specified color. |
consensus |
the consensus sequence which can be called by get_consensus(). |
disagreement |
a logical value. Displays characters that disagreememt to consensus(excludes ambiguous disagreements). |
ref |
a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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