Description Usage Arguments Value Author(s)
The layer of helix plot
1 | geom_helix(helix_data, color_by = "length", overlap = FALSE, ...)
|
helix_data |
a data frame. The file of nucleltide secondary structure and then read by ggmsa::readSSfile. |
color_by |
generate colors for helices by various rules, including integer counts and value ranges one of "length" and "value" |
overlap |
Logicals. If TRUE, two structures data called predict and known must be given(eg:heilx_data = list(known = data1, predicted = data2)), plots the predicted helices that are known on top, predicted helices that are not known on the bottom, and finally plots unpredicted helices on top in black. |
... |
additional parameter |
ggplot2 layers
Lang Zhou
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.