get_consensus: calling the consensus sequence.

Description Usage Arguments

Description

calling the consensus sequence.

Usage

1
get_consensus(tidy, ignore_gaps = FALSE, ref = NULL)

Arguments

tidy

sequence alignment with data frame, generated by tidy_msa().

ignore_gaps

a logical value. When selected TRUE, gaps in column are treated as if that row didn't exist.

ref

a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE.


ggmsa documentation built on Feb. 2, 2021, 5:14 p.m.