get_consensus: calling the consensus sequence.
In ggmsa: Plot Multiple Sequence Alignment using 'ggplot2'
Description
calling the consensus sequence.
Usage
1
get_consensus(tidy, ignore_gaps = FALSE, ref = NULL)
Arguments
tidy
sequence alignment with data frame, generated by tidy_msa().
ignore_gaps
a logical value. When selected TRUE, gaps in column are treated as if that row didn't exist.
ref
a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE.
ggmsa documentation built on Aug. 3, 2021, 9:06 a.m.
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Description
calling the consensus sequence.
Usage
1 | get_consensus(tidy, ignore_gaps = FALSE, ref = NULL)
|
Arguments
tidy |
sequence alignment with data frame, generated by tidy_msa(). |
ignore_gaps |
a logical value. When selected TRUE, gaps in column are treated as if that row didn't exist. |
ref |
a character string. Specifying the reference sequence which should be one of input sequences when 'consensus_views' is TRUE. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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