color_scheme: Assigning colors to sequence alignment.

In ggmsa: Plot Multiple Sequence Alignment using 'ggplot2'

Description

Assigning colors to sequence alignment.

Usage

color_scheme(y, color = "Chemistry_AA", custom_color = NULL)

Arguments

y	sequence alignment with data frame, generated by tidy_msa().
color	a Color scheme. One of 'Clustal', 'Chemistry_AA', 'Shapely_AA', 'Zappo_AA', 'Taylor_AA', 'LETTER', 'CN6', 'Chemistry_NT', 'Shapely_NT', 'Zappo_NT', 'Taylor_NT'. Defaults is 'Chemistry_AA'.
custom_color	A data frame with two cloumn called "names" and "color".Customize the color scheme.

ggmsa documentation built on Aug. 3, 2021, 9:06 a.m.