API for gimap
Calculate Genetic Interactions for Paired CRISPR Targets

Global functions
%>% Man page
calc_gi Man page Source code
cn_setup Man page Source code
ctrl_genes Man page Source code
delete_annotation Man page Source code
delete_example_data Man page Source code
encrypt_creds_path Man page Source code
example_data_folder Man page Source code
get_example_data Man page Source code
get_figshare Man page Source code
gimap_annotate Man page Source code
gimap_filter Man page Source code
gimap_normalize Man page Source code
gimap_object Man page Source code
gimap_stats Man page Source code
key_encrypt_creds_path Man page Source code
plot_crispr Man page Source code
plot_exp_v_obs_scatter Man page Source code
plot_options Source code
plot_rank_scatter Man page Source code
plot_targets Man page Source code
plot_theme Man page Source code
plot_volcano Man page Source code
qc_cdf Man page Source code
qc_constructs_countzero_bar Man page Source code
qc_cor_heatmap Man page Source code
qc_filter_plasmid Man page
qc_filter_zerocounts Man page
qc_plasmid_histogram Man page Source code
qc_sample_hist Man page Source code
qc_variance_hist Man page Source code
run_qc Man page Source code
save_example_data_timepoint Man page Source code
save_example_data_treatment Man page Source code
setup_data Man page Source code
supported_cell_lines Man page Source code
tpm_setup Man page Source code
gimap documentation built on June 8, 2025, 10:13 a.m.