calc_trans_mat_s15: Calculate the transition matrix for 15-state joint HMM
In hahmmr: Haplotype-Aware Hidden Markov Model for RNA
calc_trans_mat_s15 R Documentation
Calculate the transition matrix for 15-state joint HMM
Description
Calculate the transition matrix for 15-state joint HMM
Usage
calc_trans_mat_s15(t, p_s, w, states_cn, states_phase)
Arguments
t
numeric; CNV state transition probability
p_s
numeric; phase switch probability
w
numeric; relative abundance of states
states_cn
character; CNV states
states_phase
character; haplotype phase states
Value
array; transition matrix
hahmmr documentation built on Oct. 26, 2023, 1:08 a.m.
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| calc_trans_mat_s15 | R Documentation |
Calculate the transition matrix for 15-state joint HMM
Description
Calculate the transition matrix for 15-state joint HMM
Usage
calc_trans_mat_s15(t, p_s, w, states_cn, states_phase)
Arguments
t |
numeric; CNV state transition probability |
p_s |
numeric; phase switch probability |
w |
numeric; relative abundance of states |
states_cn |
character; CNV states |
states_phase |
character; haplotype phase states |
Value
array; transition matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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