l_bbinom: calculate joint likelihood of allele data

In hahmmr: Haplotype-Aware Hidden Markov Model for RNA

calculate joint likelihood of allele data

Description

calculate joint likelihood of allele data

Usage

l_bbinom(AD, DP, alpha, beta)

Arguments

AD	numeric vector Variant allele depth
DP	numeric vector Total allele depth
alpha	numeric Alpha parameter of Beta-Binomial distribution
beta	numeric Beta parameter of Beta-Binomial distribution

Value

numeric Joint log likelihood

Examples

l_bbinom(c(1, 2), c(1, 2), 1, 1)

hahmmr documentation built on Oct. 26, 2023, 1:08 a.m.