AddStratIntervals: Adds sampled stratigraphic intervals to a complete phylogeny

In hisse: Hidden State Speciation and Extinction

Adds sampled stratigraphic intervals to a complete phylogeny

Description

Takes a sampled set of stratigraphic intervals from GeteStratigraphicIntervals and adds them as segments to a plot of the phylogeny from which they were sampled.

Usage

AddStratIntervals(phy, f, ...)

Arguments

phy	a complete phylogeny that includes both extant and extinct lineages.
f	the table of sampled lineages under the fossilized birth-death process obtained from GetFossils.
...	Additional parameters to control the points. See segments.

Author(s)

Jeremy M. Beaulieu

References

Vascancelos, T, B.C. O'Meara, and J.M. Beaulieu. In prep.

hisse documentation built on Feb. 16, 2023, 10:26 p.m.