Files in hoardeR

Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices

README.md R/helpFunctions.R R/summary.fa.R R/plotHit.R R/getEnsgInfo.R R/getGeneSeq.R R/getBlastResult.R R/tableSpecies.R R/subGProbs.R R/subPhased.R R/print.fq.R R/getAnnotation.R R/subPhased_uglyFix.R R/subDose.R R/sendFA.R R/findSpecies.R R/summary.fq.R R/plotCoverage.R R/intersectXMLAnnot.R R/getFastaFromBed.R R/createSpecies.R R/getGeneLocation.R R/blastSeq.R R/print.blastRes.R R/targetScan.R R/aaa.R R/summary.blastRes.R R/print.fa.R R/getSequenceFromNCBI.R R/coverageDensity.R R/xxx.R inst/doc/hoardeR-vignette.R inst/doc/hoardeR-vignette.pdf inst/doc/hoardeR-vignette.Rmd vignettes/hoardeR-vignette.Rmd man/plotHit.Rd man/summary.fa.Rd man/getAnnotation.Rd man/getFastaFromBed.Rd man/hoardeR-package.Rd man/findSpecies.Rd man/species.Rd man/print.fa.Rd man/getGeneSeq.Rd man/subPhased.Rd man/tableSpecies.Rd man/subGprobs.Rd man/targetScan.Rd man/getSequenceFromNCBI.Rd man/intersectXMLAnnot.Rd man/getGeneLocation.Rd man/subDose.Rd man/getEnsgInfo.Rd man/blastSeq.Rd man/coverageDensity.Rd man/plotCoverage.Rd