Insertion Deletion Analysis While Accounting for Possible Missing Data

gardnerelladata | Gardnerella vaginalis phyletic data (gene family memberships)... |

indelmiss-package | Insertion deletion analysis while accounting for possible... |

indelrates | Function for estimating indel rates while accounting for... |

mycobacteriumdata1 | Mycobacterium data phyletic data (gene family memberships)... |

mycobacteriumdata2 | Alternate Mycobacterium tree. |

plot.indelmiss | Plot parameter estimates from the model fit |

plotp | Plot estimates for the parameter that accounts for possible... |

plotrates | Plot estimates for insertion and deletion rates |

plottree | Plot the tree used the branches colored according to the... |

print.indelmiss | Print summary information from fit |

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