mycobacteriumdata2: Alternate Mycobacterium tree.

In indelmiss: Insertion Deletion Analysis While Accounting for Possible Missing Data

Alternate Mycobacterium tree.

Description

Gene family memberships and a phylogenetic tree for ten species from the genus Mycobacterium.

Usage

data("mycobacteriumdata2")

Format

Contains a list that comprises a tree (called "tree") and phyletic gene family membership data (called "phyl") as its components. The tree is in the ape package phylo format. The data component consists of a data frame of 0/1 patterns with the different patterns as the rows and the 10 taxa as the columns. An entry of 1 (0) describe gene presence (absence) in the taxa.

Examples

data(mycobacteriumdata2)

indelmiss documentation built on Sept. 15, 2023, 5:16 p.m.