plot_coefficient: Plot coefficients

In inferCSN: Inferring Cell-Specific Gene Regulatory Network

Plot coefficients

Description

Plot coefficients

Usage

plot_coefficient(
  data,
  style = "continuous",
  positive_color = "#3d67a2",
  negative_color = "#c82926",
  neutral_color = "#cccccc",
  bar_width = 0.7,
  text_size = 3,
  show_values = TRUE
)

Arguments

data	Input data.
style	Plotting style: "binary", "gradient", or "continuous".
positive_color	Color for positive weights.
negative_color	Color for negative weights.
neutral_color	Color for weights near zero (used in "continuous" style).
bar_width	Width of the bars.
text_size	Size of the text for weight values.
show_values	Logical, whether to show weight values on bars.

Value

A ggplot object

Examples

data("example_matrix")
network_table <- inferCSN(example_matrix, targets = "g1")
plot_coefficient(network_table)
plot_coefficient(network_table, style = "binary")

inferCSN documentation built on April 13, 2025, 5:11 p.m.