plot_edges_comparison: Network Edge Comparison Visualization

In inferCSN: Inferring Cell-Specific Gene Regulatory Network

Network Edge Comparison Visualization

Description

Generates visualizations comparing edges of two networks.

Usage

plot_edges_comparison(
  network_table,
  ground_truth,
  color_pattern = list(predicted = "gray", ground_truth = "#bb141a", overlap = "#1966ad",
    total = "#6C757D")
)

Arguments

network_table	A data frame of predicted network structure.
ground_truth	A data frame of ground truth network.
color_pattern	A list of colors for different categories, with default values: *'predicted'* - Color for predicted edges (*'gray'*) *'ground_truth'* - Color for ground truth edges (*'#bb141a'*) *'overlap'* - Color for overlapping edges (*'#1966ad'*) *'total'* - Color for total counts (*'#6C757D'*)

Value

A patchwork plot object containing network edge comparison and distribution plots

Examples

data("example_matrix")
data("example_ground_truth")
network_table <- inferCSN(example_matrix)
plot_edges_comparison(
  network_table,
  example_ground_truth
)

inferCSN documentation built on April 13, 2025, 5:11 p.m.