gg.sf: Geom helper for sf objects

In inlabru: Bayesian Latent Gaussian Modelling using INLA and Extensions

Geom helper for sf objects

Description

This function uses geom_sf(), unless overridden by the geom argument. Requires the ggplot2 package.

Usage

## S3 method for class 'sf'
gg(data, mapping = NULL, ..., geom = "sf")

Arguments

data	An sf object.
mapping	Default mapping is ggplot2::aes(geometry = ...), where the geometry name is obtained from attr(data, "sf_column"). This is merged with the user supplied mapping.
...	Arguments passed on to geom_sf or geom_tile.
geom	Either "sf" (default) or "tile". For "tile", uses geom_tile(..., stat = "sf_coordinates"), intended for converting point data to grid tiles with the fill aesthetic, which is by default set to the first data column.

Value

A ggplot return value

See Also

Other geomes for spatial data: gg(), gg.SpatRaster(), gg.SpatialGridDataFrame(), gg.SpatialLines(), gg.SpatialPixels(), gg.SpatialPixelsDataFrame(), gg.SpatialPoints(), gg.SpatialPolygons()

Examples

  if (require("ggplot2", quietly = TRUE) &&
      requireNamespace("terra", quietly = TRUE) &&
      require("tidyterra", quietly = TRUE)) {
    # Load Gorilla data

    gorillas <- inlabru::gorillas_sf
    gorillas$gcov <- gorillas_sf_gcov()

    # Plot Gorilla elevation covariate provided as terra::rast.

    ggplot() +
      gg(gorillas$gcov$elevation)

    # Add Gorilla survey boundary and nest sightings

    ggplot() +
      gg(gorillas$gcov$elevation) +
      gg(gorillas$boundary, alpha = 0) +
      gg(gorillas$nests)

    # Load pantropical dolphin data

    mexdolphin <- inlabru::mexdolphin_sf

    # Plot the pantropical survey boundary, ship transects and dolphin sightings

    ggplot() +
      gg(mexdolphin$ppoly, alpha = 0.5) + # survey boundary
      gg(mexdolphin$samplers) + # ship transects
      gg(mexdolphin$points) # dolphin sightings

    # Change color

    ggplot() +
      gg(mexdolphin$ppoly, color = "green", alpha = 0.5) + # survey boundary
      gg(mexdolphin$samplers, color = "red") + # ship transects
      gg(mexdolphin$points, color = "blue") # dolphin sightings


    # Visualize data annotations: line width by segment number

    names(mexdolphin$samplers) # 'seg' holds the segment number
    ggplot() +
      gg(mexdolphin$samplers, aes(color = seg))

    # Visualize data annotations: point size by dolphin group size

    names(mexdolphin$points) # 'size' holds the group size
    ggplot() +
      gg(mexdolphin$points, aes(size = size))
  }

inlabru documentation built on April 3, 2025, 10:54 p.m.