Files in inlabru

Bayesian Latent Gaussian Modelling using INLA and Extensions

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/data.mrsea.R R/track_plotting.R R/inla.R R/data.mexdolphin.R R/bru_is.R R/data.Poisson2_1D.R R/transformation.R R/spatstat.R R/mapper_repeat.R R/tidiers.R R/data.shrimp.R R/data.toygroups.R R/inlabru-package.R R/mappers.R R/bru.inference.R R/model.R R/environment.R R/local_testthat.R R/stack.R R/deprecated.R R/pred_expr.R R/gcpo.R R/mapper_sum.R R/rgl.R R/mapper_collect.R R/bru_conversion.R R/plotsample.R R/bru_sp.R R/object_upgrade.R R/ggplot.R R/nlinla.R R/access_trace.R R/deltaIC.R R/effect.R R/bru_input.R R/bru.gof.R R/data.Poisson1_1D.R R/0_inlabru_envir.R R/legacy_methods.R R/sampling.R R/access_trace_methods.R R/data.gorillas.R R/used.R R/hexagon_tiling.R R/data.toypoints.R R/hierarchical_basis.R R/mapper_expr.R R/fmesher.R R/data.Poisson3_1D.R R/spde.R R/data.robins_subset.R R/bru_index.R R/utils.R R/inlabru-reexports.R

src/RcppExports.cpp

src/group_cv.cpp

inst/CITATION

inst/doc/prediction_scores.Rmd

inst/doc/bru_mapper.html

inst/doc/component.Rmd

inst/doc/component.html

inst/doc/method.R inst/doc/classes.R

inst/doc/classes.html

inst/doc/bru_mapper.Rmd inst/doc/prediction_scores.R inst/doc/articles.R inst/doc/articles.Rmd

inst/doc/method.html

inst/doc/prediction_scores.html

inst/doc/linearapprox.Rmd inst/doc/method.Rmd inst/doc/bru_mapper.R inst/doc/classes.Rmd

inst/doc/articles.html

inst/doc/linearapprox.R

inst/doc/linearapprox.html

inst/doc/component.R

inst/extdata/gorillas_cov.tif

inst/extdata/gorillas_cov.tif.aux.xml

inst/extdata/gamba.Rdata

inst/misc/2d_lgcp_residuals_functions.R

inst/misc/Lambert_ocean.png

inst/misc/2d_lgcp_residuals_functions_sp.R

build/vignette.rds

build/partial.rdb

tests/testthat.R tests/testthat/test-latent_fixed_effects.R tests/testthat/test-environment.R tests/testthat/test-linearisation.R tests/testthat/test-gcpo.R tests/testthat/test-lgcp_2d_plotsample.R tests/testthat/test-01_lgcp_2d.R tests/testthat/test-mapper_general.R tests/testthat/test-utils.R tests/testthat/test-latent_ar1.R tests/testthat/test-response_size.R tests/testthat/test-offset.R tests/testthat/test-fmesher_pixels.R tests/testthat/test-bru_sp.R tests/testthat/test-latent_clinear.R tests/testthat/test-aggregate.R tests/testthat/test-copy.R tests/testthat/test-lgcp_1d.R tests/testthat/test-data.R tests/testthat/test-lgcp_2d_covars.R tests/testthat/test-latent_rw2.R tests/testthat/test-eval_spatial.R tests/testthat/test-tidiers.R tests/testthat/test-bru_sf.R tests/testthat/test-mdata.R tests/testthat/test-globe_mesh.R tests/testthat/test-latent_factor.R tests/testthat/test-multi_like.R tests/testthat/test-component.R tests/testthat/test-mapper_expr.R tests/testthat/test-latent_spde_2d.R tests/testthat/test-latent_spde_1d.R tests/testthat/setup.R tests/testthat/test-02_predict.R tests/testthat/test-lgcp_1d_nonlinear.R tests/testthat/test-latent_linear.R tests/testthat/test-additive.R tests/testthat/_snaps/01_lgcp_2d.md tests/testthat/_snaps/lgcp_2d_plotsample.md tests/testthat/_snaps/latent_spde_1d.md tests/testthat/_snaps/lgcp_1d.md tests/testthat/_snaps/lgcp_2d_covars.md vignettes/prediction_scores.Rmd vignettes/component.Rmd vignettes/bru_mapper.Rmd vignettes/articles.Rmd vignettes/linearapprox.Rmd vignettes/method.Rmd vignettes/classes.Rmd

data/robins_subset.rda

data/Poisson3_1D.rda

data/shrimp.rda

data/Poisson1_1D.rda

data/toygroups.rda

data/toypoints.rda

data/mexdolphin_sf.rda

data/gorillas_sf.rda

data/Poisson2_1D.rda

data/mrsea.rda

man/spatial.to.ppp.Rd man/ibm_eval.Rd man/evaluate_effect.Rd man/bm_sum.Rd man/bm_const.Rd man/gorillas_sf.Rd man/bru_obs_gcpo.Rd man/lgcp.Rd man/bru_input_text.Rd man/as_bru_comp.Rd man/bru_model_mapper_methods.Rd man/multiplot.Rd man/bru_fill_missing.Rd man/shrimp.Rd man/local_testthat.Rd man/bru_eval_fun.Rd man/bru_log.Rd man/predict.Rd man/toygroups.Rd man/bm_repeat_indexing.Rd man/bm_repeat.Rd man/bm_collect.Rd man/tidy.bru.Rd man/bru_state.Rd man/reexports.Rd man/bm_multi.Rd man/bru_log_bookmark.Rd man/bru_safe_sp.Rd man/ibm_simplify.Rd man/augment.bru.Rd man/bm_linear.Rd man/as_bru_mapper.Rd man/generate.Rd man/bru_eval.Rd man/bru_formula_to_bru_obs_code.Rd man/bm_logsumexp.Rd man/bm_pipe.Rd man/bru_eval_in_data_context.Rd man/bru_obs_print.Rd man/bru_set_missing.Rd man/toypoints.Rd man/gg.SpatRaster.Rd man/ibm_invalid_output.Rd man/bm_reparam.Rd man/bru_convergence_plot.Rd man/bru_transformation.Rd man/inlabru-package.Rd man/bru_used_vars.Rd man/bm_list.Rd man/gg.RasterLayer.Rd man/bru_comp_env_extra.Rd man/ibm_eval2.Rd man/bru_compute_linearisation.Rd man/bru_log_offset.Rd man/glance.bru.Rd man/bru_inla.stack.mjoin.Rd man/bru_env_get.Rd man/bm_marginal.Rd man/point2count.Rd man/sline.Rd man/bru_mapper_generics.Rd man/bm_harmonics.Rd man/bru_comp.Rd man/mexdolphin.Rd man/bru_names.Rd man/bru_used.Rd man/ibm_n.Rd man/ibm_input.Rd man/gg.fm_mesh_2d.Rd man/robins_subset.Rd man/bru_is_linear.Rd man/bm_fm_mesh_old.Rd man/ibm_jacobian.Rd man/bm_summary.Rd man/bru_inla_formula.Rd man/ibm_eval_methods.Rd man/gg.bru_prediction.Rd man/bru_gcpo_table.Rd man/sample.lgcp.Rd man/glplot.Rd man/gorillas.Rd man/cv_partition.Rd man/bru_comp_list.Rd man/gg.Spatial.Rd man/as_bru_obs.Rd man/plotsample.Rd man/summary.bru_options.Rd man/ibm_is_rowwise.Rd man/bru_standardise_names.Rd man/bru_safe_terra.Rd man/bru_pred_expr.Rd man/ibm_values.Rd man/bru_used_update.Rd man/gg.sf.Rd man/bru_get_mapper.Rd man/summary.bru_comp.Rd man/gg.matrix.Rd man/bru_block_gcpo.Rd man/gg.fm_mesh_1d.Rd man/devel.cvmeasure.Rd man/bru_make_stack.Rd man/bru_obs.Rd man/evaluate_model.Rd man/parse_inclusion.Rd man/summary.bru_input.Rd man/bru_comp_eval.Rd man/bm_fmesher.Rd man/bm_scale.Rd man/expand_labels.Rd man/bru_index.Rd man/bru_model.Rd man/spde.posterior.Rd man/bm_logitaverage.Rd man/inla_subset_eval.Rd man/bm_shift.Rd man/bru_log_message.Rd man/bru_inla.stack.mexpand.Rd man/Poisson3_1D.Rd man/mexdolphin_sf.Rd man/bm_expr.Rd man/inlabru_group_cv_block_conversion.Rd man/bru_timings.Rd man/mrsea.Rd man/pcmatern_B.Rd man/eval_spatial.Rd man/ibm_is_linear.Rd man/bru_input.Rd man/bru.Rd man/evaluate_predictor.Rd man/bru_safe_inla.Rd man/materncov.bands.Rd man/Poisson2_1D.Rd man/bru_timings_plot.Rd man/bru_mapper.Rd man/add_mappers.Rd man/ibm_as_taylor.Rd man/inlabru-deprecated.Rd man/cv_hex.Rd man/bru_options.Rd man/bru_response_size.Rd man/extract_property.Rd man/Poisson1_1D.Rd man/bincount.Rd man/bm_index.Rd man/bru_is_rowwise.Rd man/bru_summarise.Rd man/bm_taylor.Rd man/bru_obs_methods.Rd man/spoly.Rd man/bru_call_options.Rd man/plot.bru.Rd man/gg.Rd man/bru_is_additive.Rd man/new_bru_used.Rd man/iinla.Rd man/bru_info.Rd man/new_bru_log.Rd man/lgcp_IC.Rd man/ibm_n_output.Rd man/deltaIC.Rd man/bru_data_mask.Rd man/bm_factor.Rd man/bm_matrix.Rd man/bru_log_reset.Rd man/ibm_names.Rd man/bm_aggregate.Rd man/ibm_inla_subset.Rd man/bm_fm_mesh_1d.Rd

man/figures/README-example-1.png

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/figures/lifecycle-soft-deprecated.svg

man/figures/lifecycle-questioning.svg

man/figures/lifecycle-archived.svg

man/figures/lifecycle-defunct.svg

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-deprecated.svg

man/figures/README-plot-1.png

man/figures/lifecycle-maturing.svg

inlabru documentation built on July 28, 2026, 9:07 a.m.