Files in inlabru

Bayesian Latent Gaussian Modelling using INLA and Extensions

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/data.mrsea.R R/track_plotting.R R/inla.R R/mesh.R R/data.mexdolphin.R R/data.Poisson2_1D.R R/transformation.R R/spatstat.R R/data.seals.R R/data.shrimp.R R/data.toygroups.R R/inlabru-package.R R/mappers.R R/bru.inference.R R/model.R R/environment.R R/local_testthat.R R/stack.R R/deprecated.R R/rgl.R R/plotsample.R R/ggplot.R R/integration.R R/nlinla.R R/deltaIC.R R/effect.R R/bru.gof.R R/data.Poisson1_1D.R R/0_inlabru_envir.R R/sampling.R R/bru.integration.R R/data.gorillas.R R/fmesher.R R/bru.spatial.R R/data.Poisson3_1D.R R/spde.R R/data.robins_subset.R R/utils.R

inst/CITATION

inst/doc/prediction_scores.Rmd

inst/doc/bru_mapper.html

inst/doc/website_examples.R inst/doc/component.Rmd

inst/doc/component.html

inst/doc/method.R inst/doc/bru_mapper.Rmd inst/doc/prediction_scores.R

inst/doc/website_examples.html

inst/doc/method.html

inst/doc/prediction_scores.html

inst/doc/website_examples.Rmd inst/doc/linearapprox.Rmd inst/doc/method.Rmd inst/doc/bru_mapper.R inst/doc/linearapprox.R

inst/doc/linearapprox.html

inst/doc/component.R inst/examples/generate.bru.R inst/examples/gg.inla.mesh.R inst/examples/data.toygroups.R inst/examples/prediction.bru.R inst/examples/rgl.R inst/examples/like.R inst/examples/gg.spatial.R inst/examples/predict.bru.R inst/examples/spde.posterior.R inst/examples/gg.prediction.R inst/examples/devel.cvmeasure.R inst/examples/bru.R

inst/extdata/gorillas_cov.tif

inst/extdata/gorillas_cov.tif.aux.xml

inst/extdata/gamba.Rdata

inst/misc/2d_lgcp_residuals_functions.R

inst/misc/Lambert_ocean.png

build/vignette.rds

tests/testthat.R tests/testthat/test-latent_fixed_effects.R tests/testthat/test-environment.R tests/testthat/test-linearisation.R tests/testthat/test-lgcp_2d_plotsample.R tests/testthat/test-utils.R tests/testthat/test-latent_ar1.R tests/testthat/test-predict.R tests/testthat/test-offset.R tests/testthat/test-fmesher_pixels.R tests/testthat/test-latent_clinear.R tests/testthat/test-aggregate.R tests/testthat/test-copy.R tests/testthat/test-lgcp_1d.R tests/testthat/test-data.R tests/testthat/test-lgcp_2d_covars.R tests/testthat/test-latent_rw2.R tests/testthat/test-eval_spatial.R tests/testthat/test-skips.R tests/testthat/test-bru_sf.R tests/testthat/test-mdata.R tests/testthat/test-mapper.R tests/testthat/test-globe_mesh.R tests/testthat/test-latent_factor.R tests/testthat/test-multi_like.R tests/testthat/test-component.R tests/testthat/test-latent_spde_2d.R tests/testthat/test-latent_spde_1d.R tests/testthat/test-old_integration.R tests/testthat/setup.R tests/testthat/test-lgcp_1d_nonlinear.R tests/testthat/test-latent_linear.R tests/testthat/test-lgcp_2d.R tests/testthat/_snaps/lgcp_2d.md tests/testthat/_snaps/latent_spde_2d.md tests/testthat/_snaps/lgcp_2d_plotsample.md tests/testthat/_snaps/latent_spde_1d.md tests/testthat/_snaps/lgcp_1d.md tests/testthat/_snaps/lgcp_2d_covars.md vignettes/prediction_scores.Rmd vignettes/component.Rmd vignettes/bru_mapper.Rmd vignettes/website_examples.Rmd vignettes/linearapprox.Rmd vignettes/method.Rmd

data/robins_subset.rda

data/Poisson3_1D.rda

data/shrimp.rda

data/seals_sp.rda

data/mexdolphin.rda

data/Poisson1_1D.rda

data/toygroups.rda

data/mexdolphin_sf.rda

data/gorillas_sf.rda

data/Poisson2_1D.rda

data/mrsea.rda

data/gorillas.rda

man/bru_mapper_collect.Rd man/spatial.to.ppp.Rd man/bru_mapper_linear.Rd man/evaluate_effect.Rd man/bru_mapper_matrix.Rd man/gorillas_sf.Rd man/gg.inla.mesh.Rd man/lgcp.Rd man/multiplot.Rd man/bru_mapper_logsumexp.Rd man/bru_fill_missing.Rd man/shrimp.Rd man/local_testthat.Rd man/gg.data.frame.Rd man/bru_log.Rd man/toygroups.Rd man/plot.bru_prediction.Rd man/gg.SpatialPolygons.Rd man/reexports.Rd man/bru_log_bookmark.Rd man/bru_safe_sp.Rd man/bru_mapper_aggregate.Rd man/generate.Rd man/bru_mapper_marginal.Rd man/bru_mapper_multi.Rd man/bru_mapper_taylor.Rd man/integration_weight_aggregation.Rd man/gg.SpatRaster.Rd man/gm.Rd man/bru_convergence_plot.Rd man/bru_transformation.Rd man/inlabru-package.Rd man/bru_used_vars.Rd man/bm_list.Rd man/gg.RasterLayer.Rd man/bru_like_methods.Rd man/bru_compute_linearisation.Rd man/bru_log_offset.Rd man/gg.SpatialPoints.Rd man/evaluate_comp_simple.Rd man/code.components.Rd man/bru_env_get.Rd man/point2count.Rd man/sline.Rd man/bru_mapper_generics.Rd man/mexdolphin.Rd man/input_eval.Rd man/summary.component.Rd man/bru_used.Rd man/component_eval.Rd man/bru_mapper_index.Rd man/component.Rd man/eval_in_data_context.Rd man/robins_subset.Rd man/evaluate_index.Rd man/bru_int_polygon.Rd man/gg.bru_prediction.Rd man/bru_mapper_fm_mesh_1d.Rd man/sample.lgcp.Rd man/glplot.Rd man/gorillas.Rd man/globe.Rd man/plotsample.Rd man/summary.bru_options.Rd man/summary.bru.Rd man/gg.SpatialLines.Rd man/evaluate_comp_simple_list_subsetting.Rd man/gg.SpatialGridDataFrame.Rd man/inla.stack.mjoin.Rd man/ipoints.Rd man/gmap.Rd man/bru_standardise_names.Rd man/bru_mapper_fm_mesh_2d.Rd man/bru_log_new.Rd man/pixels.Rd man/bru_used_update.Rd man/gg.sf.Rd man/bru_get_mapper.Rd man/component_list.Rd man/seals.Rd man/gg.matrix.Rd man/devel.cvmeasure.Rd man/bru_make_stack.Rd man/evaluate_comp_lin.Rd man/evaluate_model.Rd man/parse_inclusion.Rd man/expand_labels.Rd man/bru_model.Rd man/spde.posterior.Rd man/inla_subset_eval.Rd man/bru_log_message.Rd man/cprod.Rd man/Poisson3_1D.Rd man/mexdolphin_sf.Rd man/like.Rd man/mrsea.Rd man/pcmatern_B.Rd man/eval_spatial.Rd man/bru.Rd man/evaluate_predictor.Rd man/bru_mapper_factor.Rd man/bru_safe_inla.Rd man/materncov.bands.Rd man/bru_mapper_summary.Rd man/Poisson2_1D.Rd man/bru_timings_plot.Rd man/bru_mapper.Rd man/add_mappers.Rd man/inlabru-deprecated.Rd man/bru_options.Rd man/index_eval.Rd man/extract_property.Rd man/Poisson1_1D.Rd man/bincount.Rd man/gg.inla.mesh.1d.Rd man/predict.bru.Rd man/bru_mapper_pipe.Rd man/bru_mapper_shift.Rd man/bru_summarise.Rd man/spoly.Rd man/bru_call_options.Rd man/plot.bru.Rd man/row_kron.Rd man/gg.SpatialPixelsDataFrame.Rd man/gg.Rd man/bru_mapper_const.Rd man/evaluate_inputs.Rd man/iinla.Rd man/bru_info.Rd man/bru_mapper_harmonics.Rd man/bru_mapper_scale.Rd man/deltaIC.Rd man/bru_mapper_mesh_B.Rd man/bru_log_reset.Rd man/gg.SpatialPixels.Rd man/comp_lin_eval.Rd

man/figures/README-example-1.png

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/figures/lifecycle-soft-deprecated.svg

man/figures/lifecycle-questioning.svg

man/figures/lifecycle-archived.svg

man/figures/lifecycle-defunct.svg

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-deprecated.svg

man/figures/lifecycle-maturing.svg

inlabru documentation built on Nov. 2, 2023, 6:07 p.m.