countBaseComposition: Function performs an analysis of base composition including...
In kmeRtone: Multi-Purpose and Flexible k-Meric Enrichment Analysis Software
View source: R/countBaseComposition.R
countBaseComposition R Documentation
Function performs an analysis of base composition including sequence
frequency, PWM calculations, and G/C content at various window sizes.
Description
Function performs an analysis of base composition including sequence
frequency, PWM calculations, and G/C content at various window sizes.
Usage
countBaseComposition(case, genome, case.pattern, output.path = "./")
Arguments
case
A Coordinate class object or similar structure.
genome
Genome class object or similar structure.
case.pattern
String patterns to consider in the analysis.
output.path
Output path for saving the analysis results.
kmeRtone documentation built on Sept. 11, 2024, 9:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/countBaseComposition.R
| countBaseComposition | R Documentation |
Function performs an analysis of base composition including sequence frequency, PWM calculations, and G/C content at various window sizes.
Description
Function performs an analysis of base composition including sequence frequency, PWM calculations, and G/C content at various window sizes.
Usage
countBaseComposition(case, genome, case.pattern, output.path = "./")
Arguments
case |
A Coordinate class object or similar structure. |
genome |
Genome class object or similar structure. |
case.pattern |
String patterns to consider in the analysis. |
output.path |
Output path for saving the analysis results. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.