countRevCompKmers: Count reverse complement sequence from its opposite strand....
In kmeRtone: Multi-Purpose and Flexible k-Meric Enrichment Analysis Software
View source: R/countRevCompKmers.R
countRevCompKmers R Documentation
Count reverse complement sequence from its opposite strand.
Build for k-mer table generated from initKmerTable function but applicable to
others with the same format.
Description
Count reverse complement sequence from its opposite strand.
Build for k-mer table generated from initKmerTable function but applicable to
others with the same format.
Usage
countRevCompKmers(kmer.table)
Arguments
kmer.table
A data.table of k-mer with at least 3 columns: kmer,
pos_strand, and neg_strand. Splitted k-mer columns: kmer_part1 and
kmer_part2 is supported.
Value
Updated k-mer table.
kmeRtone documentation built on Sept. 11, 2024, 9:12 p.m.
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View source: R/countRevCompKmers.R
| countRevCompKmers | R Documentation |
Count reverse complement sequence from its opposite strand. Build for k-mer table generated from initKmerTable function but applicable to others with the same format.
Description
Count reverse complement sequence from its opposite strand. Build for k-mer table generated from initKmerTable function but applicable to others with the same format.
Usage
countRevCompKmers(kmer.table)
Arguments
kmer.table |
A data.table of k-mer with at least 3 columns: kmer, pos_strand, and neg_strand. Splitted k-mer columns: kmer_part1 and kmer_part2 is supported. |
Value
Updated k-mer table.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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