format_mQTL: Routine to reformat the data into the required format
In mQTL: Metabolomic Quantitative Trait Locus Mapping

Description Usage Arguments Value Author(s) See Also Examples

This function enables to reformat data into the proper format. The user should provides in input metabolomic dataset, Genotype dataset and a dataset containing sex and pgm (parental grandmother).

1	format_mQTL(datafile, genofile, physdat, outdat, outgeno)

`datafile`	metabolomic data file
`genofile`	genotype data file
`physdat`	a file containing sex and pgm
`outdat`	phenotype data (metabolomic data + sex + pgm) in the format csvs
`outgeno`	genotype data

It returns phynotype and genotype files in the proper format

Lyamine Hedjazi

align_mQTL,

  ## Not run: 
## Clean the raw data to match the genotype and phenotype and create the proper format

  rawfile<-"MetaboFile.dat" ## Metabolomic data file
  genofile<-"GenoFile.dat" ## Genotype data file
  physiodat="physiodat.dat" ## data file containing sex and pgm 
  cleandat<-"CleanMetaboFile.dat" ## Metabolomic data file in csvs format
  cleangen<-"CleanGenoFile.dat" ## Genotype data file in csvs format

  format_mQTL(rawfile,genofile,physiodat, cleandat,cleangen)

## End(Not run)