summary_mQTL: Function to summarize the results of a all the runs and their...
In mQTL: Metabolomic Quantitative Trait Locus Mapping

Description Usage Arguments Details Value Author(s) See Also Examples

This function generates a table containing the genetic markers and thier associated metabolomic variables and estimated LOD score.

1	summary_mQTL(results, Th = 5)

`results`	mQTL mapping results
`Th`	Threshold of the top accepted LOD

Generates a text file containing a table of results

returns Summaries

Jean-Baptiste Cazier and Lyamine Hedjazi

pre_mQTL

  ## Not run: 

## Pre-process data 

    infile<-"ReducedData.dat" ## Reduced data by SRV
    cleangen<-"CleanGenoFile.dat" ## Genotype data file in csvs format
    nperm <- 0 ## Number of permutations
    MQTL_results<-process_mQTL(infile, cleangen, nperm))
    
    T=10 ## LOD threshold
    summary_mQTL(results,T=8)## summarizes mQTL results in a table


## End(Not run)