mQTL-package: Metabolomic Quantitative Trait Locus mapping
In mQTL: Metabolomic Quantitative Trait Locus Mapping
Description
mQTL provides a complete QTL analysis pipeline for 1H NMR data. Distinctive features include normalisation using QPN approach, peak alignment using RSPA approach, dimensionality reduction using SRV approach and finally QTL mapping using R/qtl package.
Details
Package: mQTL
Type: Package
Version: 1.0
Date: 2013-09-18
License: GPL (>= 3)
Main fucntions:
-
format_mQTL: creates the proper format of data
-
align_mQTL: peak alignment and normalisation
-
pre_mQTL: dimension reduction by statistical recoupling of variables
-
process_mQTL: computes LODs using extended Haley-Knott method
-
post_mQTL: plots the results of a given run
-
summary_mQTL: provides the results as a table
Author(s)
Lyamine Hedjazi and Jean-Baptiste Cazier
Maintainer: Lyamine Hedjazi <l.hedjazi@fondation-ican.com>
mQTL documentation built on May 1, 2019, 7:30 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
mQTL provides a complete QTL analysis pipeline for 1H NMR data. Distinctive features include normalisation using QPN approach, peak alignment using RSPA approach, dimensionality reduction using SRV approach and finally QTL mapping using R/qtl package.
Details
| Package: | mQTL |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2013-09-18 |
| License: | GPL (>= 3) |
Main fucntions:
-
format_mQTL: creates the proper format of data -
align_mQTL: peak alignment and normalisation -
pre_mQTL: dimension reduction by statistical recoupling of variables -
process_mQTL: computes LODs using extended Haley-Knott method -
post_mQTL: plots the results of a given run -
summary_mQTL: provides the results as a table
Author(s)
Lyamine Hedjazi and Jean-Baptiste Cazier
Maintainer: Lyamine Hedjazi <l.hedjazi@fondation-ican.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.