post_mQTL: Plot top LOD results

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/mQTL.R

Description

Function to plot the results of a given run

Usage

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post_mQTL(results, probs = c(0.95, 0.99, 0.999, 0.9999))

Arguments

results

results of mQTL analysis.

probs

numeric vector of probabilities with values in [0,1]. (Values up to 2e-14 outside that range are accepted and moved to the nearby endpoint.).

Details

This function plots differents results corresponding to top LOD marker

Value

It returns graphs and summaries

Author(s)

Jean-Baptiste Cazier

See Also

pre_mQTL

Examples

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  ## Not run: 
## Pre-process data 

    infile<-"ReducedData.dat" ## Reduced data by SRV
    cleangen<-"CleanGenoFile.dat" ## Genotype data file in csvs format
    nperm <- 0 ## Number of permutations
    MQTL_results<-process_mQTL(infile, cleangen, nperm))

    post_mQTL(results)## Plot mQTL results


## End(Not run)

mQTL documentation built on May 29, 2017, 9:46 a.m.