plot.mappoly.homoprob: Plots mappoly.homoprob

In mappoly: Genetic Linkage Maps in Autopolyploids

Plots mappoly.homoprob

Description

Plots mappoly.homoprob

Usage

## S3 method for class 'mappoly.homoprob'
plot(
  x,
  stack = FALSE,
  lg = NULL,
  ind = NULL,
  use.plotly = TRUE,
  verbose = TRUE,
  ...
)

Arguments

x	an object of class mappoly.homoprob
stack	logical. If TRUE, probability profiles of all homologues are stacked in the plot (default = FALSE)
lg	indicates which linkage group should be plotted. If NULL (default), it plots the first linkage group. If "all", it plots all linkage groups
ind	indicates which individuals should be plotted. It can be the position of the individuals in the dataset or it's name. If NULL (default), the function plots the first individual
use.plotly	if TRUE (default), it uses plotly interactive graphic
verbose	if TRUE (default), the current progress is shown; if FALSE, no output is produced
...	unused arguments

mappoly documentation built on May 29, 2024, 6:05 a.m.