# ge_effects: Genotype-environment effects In metan: Multi Environment Trials Analysis

 ge_effects R Documentation

## Genotype-environment effects

### Description

This is a helper function that computes the genotype-environment effects, i.e., the residual effect of the additive model

### Usage

ge_effects(.data, env, gen, resp, type = "ge", verbose = TRUE)


### Arguments

 .data The dataset containing the columns related to Environments, Genotypes, replication/block and response variable(s). env The name of the column that contains the levels of the environments. The analysis of variance is computed for each level of this factor. gen The name of the column that contains the levels of the genotypes. resp The response variable(s). To analyze multiple variables in a single procedure a vector of variables may be used. For example resp = c(var1, var2, var3). type The type of effect to compute. Defaults to "ge", i.e., genotype-environment. To compute genotype plus genotype-environment effects use type = "gge". verbose Logical argument. If verbose = FALSE the code will run silently.

### Value

A list where each element is the result for one variable that contains a two-way table with genotypes in rows and environments in columns.

### Author(s)

Tiago Olivoto tiagoolivoto@gmail.com

### Examples


library(metan)
ge_eff <- ge_effects(data_ge, ENV, GEN, GY)
gge_eff <- ge_effects(data_ge, ENV, GEN, GY, type = "gge")
plot(ge_eff)



metan documentation built on March 7, 2023, 5:34 p.m.