Nothing
context("Test: PlotRE() ")
data(PhyloExpressionSetExample)
data(DivergenceExpressionSetExample)
nonStandardExpressionSet <- PhyloExpressionSetExample[, 2:9]
test_that("is.ExpressionSet() throughs error when no ExpressionSet is entered to PlotRE()",
{
expect_error(
PlotRE(nonStandardExpressionSet, list(1:3, 4:12), "PS")
)
})
test_that("error occurs when Groups are not specified ", {
expect_error(
PlotRE(PhyloExpressionSetExample),
"Your Groups list does not store any items."
)
})
test_that(
"error occurs when PS or DS are specified in Groups which are not present in the ExpressionSet ",
{
expect_error(
PlotRE(PhyloExpressionSetExample, list(1:3, 4:13), "PS"),
"There are items in your Group elements that are not available in the age column of your ExpressionSet."
)
expect_error(
PlotRE(DivergenceExpressionSetExample, list(1:12), "DS"),
"There are items in your Group elements that are not available in the age column of your ExpressionSet."
)
}
)
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