iedb_consensus_mhci_nmer is a method to predict conservation of epitopes among orthologs for MHCI using IEDB-consensus server data
A character vector of epitope length
This function takes epitope length as input into epi_length object. Input data for this function is present in "/data_mycobacrvR/IEDBconsensus_mhci_out" directory, therefore set working directory to "~/data_mycobacrvR/IEDBconsensus_mhci_out/" before using this function. IEDB server provides epitopes by selecting window size of epitope length such as 8, 9, 10. Therefore epi_length should be given as "10mer".
iedb_consensus_mhci_nmer() will write two files in the working directory. One file contains the information of epitope and the other file contains metadata for epitope showing orthologs of H37Rv
## Not run: iedb_consensus_mhci_nmer("10mer") ##Conservation of epitopes from IEDB server
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.