netmhcNN_nmer is a method to conservation of epitopes among orthologs from NetMHC server 3.0 using artificial neural networks (ANNs)
A character vector of epitope length
This function takes epitope length as input into epi_length object. Input data for this function is present in "/data_mycobacrvR/netmhcNN_out" directory, therefore this directory as working directory before using this function. NetMHC server 3.0 provides epitopes by selecting window size of epitope length such as 8mer, 9mer, 10mer, 11mer. Therefore epi_length should be given as "10mer".
netmhcNN_nmer() will write two files in the working directory. One file contains the information of epitope and the other file contains metadata for epitope showing orthologs of H37Rv
## Not run: netmhcNN_nmer("10mer") ##Conservation of 10mer epitopes from NetMHC server
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.