kidney: Cytogenetic Data from Kidney Carcinoma

Description Usage Format


This data set contains cytogenetic data from 173 cases of renal clear cell carcinoma, covering 7 frequent chromosomal aberrations, as well as the corresponding maximum likelihood tree model.




A list with the following components:

  • xthe binary data matrix

  • resthe ML tree model, a list with components:

    • treethe tree in matrix format

    • pthe conditional probabilities associated with the edges

    • var.namescharacter vector of variable names

    • totloglikthe log-likelihood of the tree model.

    • newickthe tree model in Newick format

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