kidney: Cytogenetic Data from Kidney Carcinoma

Description Usage Format

Description

This data set contains cytogenetic data from 173 cases of renal clear cell carcinoma, covering 7 frequent chromosomal aberrations, as well as the corresponding maximum likelihood tree model.

Usage

1

Format

A list with the following components:

  • xthe binary data matrix

  • resthe ML tree model, a list with components:

    • treethe tree in matrix format

    • pthe conditional probabilities associated with the edges

    • var.namescharacter vector of variable names

    • totloglikthe log-likelihood of the tree model.

    • newickthe tree model in Newick format



Search within the oncomodel package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.