Compare with Tree Format

This data set contains cytogenetic data from 173 cases of renal clear cell carcinoma, covering 7 frequent chromosomal aberrations, as well as the corresponding maximum likelihood tree model.

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A list with the following components:

xthe binary data matrix

resthe ML tree model, a list with components:

treethe tree in matrix format

pthe conditional probabilities associated with the edges

var.namescharacter vector of variable names

totloglikthe log-likelihood of the tree model.

newickthe tree model in Newick format

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