leafset.prob2: Probability of a Set of Leaves
In oncomodel: Maximum likelihood tree models for oncogenesis

Computes the probability of a set of leaves (chromosomal aberrations) in an oncogenetic tree model.

1	leafset.prob2(leafset, y)

`leafset`	a character vector of one or more leaves (chromosomal aberrations).
`y`	the tree model as obtained from MLtopology.

The probability of exactly the given set of leaves (chromosomal aberrations) of the tree.

von Heydebreck A, Gunawan B, Fuezesi L. 2004. Maximum likelihood estimation of oncogenetic tree models. Biostatistics 5:545-556.

1 2	data(kidney) leafset.prob2(c("-3\|-3p", "+5\|+5q"), kidney$res)

oncomodel documentation built on May 1, 2019, 8:01 p.m.

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