Files in optiSel
Optimum Contribution Selection and Population Genetics
MD5
NAMESPACE
DESCRIPTION
R/con2df.R
R/RcppExports.R
R/addContributions.R
R/prePed.R
R/summary4opticont.R
R/getcskip.R
R/bounds4cand.R
R/opticont.R
R/completeness.R
R/characterizeClasses.R
R/lc4cand.R
R/noffspring.R
R/summary.Pedig.R
R/sampleIndiv.R
R/segIBD.R
R/read.indiv.R
R/opticomp.R
R/subPed.R
R/checkphen.R
R/segN.R
R/NPOdata.R
R/sim2dis.R
R/qcrc4cand.R
R/plot.HaploFreq.R
R/pedIBD.R
R/segIBDatN.R
R/matings.R
R/onAttach.R
R/param4candes.R
R/pedIBDatN.R
R/meankin.R
R/getskip.R
R/segIBDandN.R
R/checkbc.R
R/pedplot.R
R/genecont.R
R/segBreedComp.R
R/pPOpop.R
R/agecont.R
R/gettraits.R
R/checkcon.R
R/haplofreq.R
R/printParam4candes.R
R/pedBreedComp.R
R/pedIBDorM.R
R/segInbreeding.R
R/addClasses.R
R/fun4Kin.R
R/pedInbreeding.R
R/checkcont.R
R/f4cand.R
R/NPOpopALT.R
R/freqlist.R
R/genecontALT.R
R/characterizeBreeds.R
R/fun4KinatN.R
R/candes.R
R/getNe.R
R/conttac.R
R/extractKinships.R
R/summary.candes.R
R/makeA.R
R/bc4candes.R
src/rcpp_makeA_lowMem.cpp
src/Makevars.win
src/Makevars
src/RcppExports.cpp
src/rcpp_haplofreq.cpp
src/rcpp_segBreedComp.cpp
src/rcpp_segIBDandN.cpp
src/rcpp_makeA.cpp
src/rcpp_genecont.cpp
src/rcpp_segN.cpp
src/rcpp_segInbreeding.cpp
src/rcpp_segIBD.cpp
src/rcpp_completeness.cpp
src/rcpp_segIBDandNVersion2.cpp
inst/doc/seg-vignette.Rmd
inst/doc/ocs-vignette.Rmd
inst/doc/ped-vignette.Rmd
inst/doc/seg-vignette.html
inst/doc/seg-vignette.R
inst/doc/ped-vignette.html
inst/doc/ocs-vignette.html
inst/doc/ocs-vignette.R
inst/doc/ped-vignette.R
inst/extdata/Chr1.phased
inst/extdata/Chr2.phased
build/vignette.rds
build/partial.rdb
vignettes/seg-vignette.Rmd
vignettes/ocs-vignette.Rmd
vignettes/ped-vignette.Rmd
vignettes/references.bib
vignettes/HaplotypeEval/freq.Angler.Chr1.in.others.txt
vignettes/HaplotypeEval/match.Angler.Chr1.in.others.txt
vignettes/HaplotypeEval/freq.Angler.Chr2.in.others.txt
vignettes/HaplotypeEval/match.Angler.Chr2.in.others.txt
data/map.rda
data/Cattle.rda
data/ExamplePed.rda
data/PedigWithErrors.rda
data/Phen.rda
man/optiSel-package.Rd
man/pedInbreeding.Rd
man/segInbreeding.Rd
man/freqlist.Rd
man/haplofreq.Rd
man/pedIBDorM.Rd
man/agecont.Rd
man/noffspring.Rd
man/completeness.Rd
man/opticont.Rd
man/plot.HaploFreq.Rd
man/ExamplePed.Rd
man/opticomp.Rd
man/candes.Rd
man/read.indiv.Rd
man/Cattle.Rd
man/pedBreedComp.Rd
man/matings.Rd
man/map.Rd
man/Phen.Rd
man/sim2dis.Rd
man/subPed.Rd
man/segIBDandN.Rd
man/prePed.Rd
man/genecont.Rd
man/segBreedComp.Rd
man/segIBD.Rd
man/conttac.Rd
man/summary.Pedig.Rd
man/sampleIndiv.Rd
man/makeA.Rd
man/Chr2.phased.Rd
man/pedIBD.Rd
man/segIBDatN.Rd
man/pedIBDatN.Rd
man/summary.candes.Rd
man/pedplot.Rd
man/segN.Rd
man/Chr1.phased.Rd
man/PedigWithErrors.Rd
