peplib: Peptide Library Analysis Methods

This package provides a variety of methods for dealing with analysis of peptide library data, including clustering, motif finding, and QSAR model fitting.

AuthorAndrew White <white.d.andrew@gmail.com>
Date of publication2013-04-15 10:20:32
MaintainerAndrew White <white.d.andrew@gmail.com>
LicenseGPL (>= 2)
Version1.5.1

View on CRAN

Functions

aclust Man page
AMPSequences Man page
AMPSequences.response Man page
BIC Man page
BIC,MotifModel-method Man page
BIC,MotifModelSet-method Man page
blosum50 Man page
blosum62 Man page
blosum90 Man page
changeClusterFormat Man page
classify Man page
classify,MotifModelSet-method Man page
defaultBaseMatrix Man page
default.MetricParams Man page
descriptors Man page
Descriptors Man page
Descriptors-class Man page
dist,Sequences-method Man page
logLik,MotifModel-method Man page
logLik,MotifModelSet-method Man page
logLik,OOPS-method Man page
logLik,SSOOPS-method Man page
logLik,ZOOPS-method Man page
MetricParams Man page
MetricParams-class Man page
motifModel Man page
MotifModel Man page
MotifModel-class Man page
motifModelSet Man page
MotifModelSet Man page
MotifModelSet-class Man page
motifString Man page
motifString,MotifModel-method Man page
plot,Descriptors-method Man page
plotFits Man page
plotFits,MotifModel-method Man page
plot,MotifModel-method Man page
plot,MotifModelSet-method Man page
plotPositions Man page
plotPositions,MotifModel-method Man page
plot,Sequences-method Man page
plotStartingPosition Man page
plotStartingPosition,MotifModel-method Man page
predict,MotifModel-method Man page
predict,MotifModelSet-method Man page
print,MotifModel-method Man page
rbind,Sequences-method Man page
read.fasta Man page
read.sequences Man page
residuals,MotifModel-method Man page
residuals,MotifModelSet-method Man page
Sequences Man page
Sequences-class Man page
[,Sequences-method Man page
SHP2Sequences Man page
simpleDescriptors Man page
TULASequences Man page
write.fasta Man page
write.sequences Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.