default.MetricParams: Default parameters for calculating sequence-sequence...
In peplib: Peptide Library Analysis Methods
Description
Consists of the BLOSUM62 substitution matrix and a gap open penalty of
10 and gap extension penalty of 0.2. These are used when comparing sequences.
Format
An object of class MetricParams
References
Henikoff, S.; Henikoff, J.G. (1992). "Amino Acid Substitution Matrices
from Protein Blocks". PNAS 89 (22): 10915-10919.
peplib documentation built on May 29, 2017, 10:52 p.m.
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Description
Consists of the BLOSUM62 substitution matrix and a gap open penalty of 10 and gap extension penalty of 0.2. These are used when comparing sequences.
Format
An object of class MetricParams
References
Henikoff, S.; Henikoff, J.G. (1992). "Amino Acid Substitution Matrices from Protein Blocks". PNAS 89 (22): 10915-10919.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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