getNextRightFocal: Expand the neighborhood to the right
In perfectphyloR: Reconstruct Perfect Phylogenies from DNA Sequence Data
Description
Usage
Arguments
Value
Examples
View source: R/find_SNV_utility_functions.R
Description
This function tries to expand the neighborhood to the right, when the next SNV
from getNextFromFocal function is incompatible with each SNV in
the neighborhood of the focal SNV, and this incompatible SNV could be to the
left of the neighborhood.
Usage
1
getNextRightFocal(current, absDist)
Arguments
current
Current SNVs in the neighborhood of focal SNV.
absDist
Absolute distance of SNVs from the focal SNV in base pairs.
Value
An index of a SNV.
Examples
1
perfectphyloR documentation built on March 8, 2021, 9:06 a.m.
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Description Usage Arguments Value Examples
View source: R/find_SNV_utility_functions.R
Description
This function tries to expand the neighborhood to the right, when the next SNV
from getNextFromFocal function is incompatible with each SNV in
the neighborhood of the focal SNV, and this incompatible SNV could be to the
left of the neighborhood.
Usage
1 | getNextRightFocal(current, absDist)
|
Arguments
current |
Current SNVs in the neighborhood of focal SNV. |
absDist |
Absolute distance of SNVs from the focal SNV in base pairs. |
Value
An index of a SNV.
Examples
1 |
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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