performTest: Perform the user-provided association test
In perfectphyloR: Reconstruct Perfect Phylogenies from DNA Sequence Data
View source: R/association_tests_utility_functions.R
Description
This function directs to perform the user-given method.
Usage
1
performTest(Dx, Dy, testname, nperm)
Arguments
Dx
A numeric matrix of pairwise distances.
Dy
A second numeric matrix of pairwise distances.
testname
Association methods. Use "HHG" for HHG test, "dCor" for dCOr test, "Mantel" for
mantel test, "RV" for RV test and "RI" for Rand index test.
nperm
Numer of permutations.
perfectphyloR documentation built on March 8, 2021, 9:06 a.m.
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View source: R/association_tests_utility_functions.R
Description
This function directs to perform the user-given method.
Usage
1 | performTest(Dx, Dy, testname, nperm)
|
Arguments
Dx |
A numeric matrix of pairwise distances. |
Dy |
A second numeric matrix of pairwise distances. |
testname |
Association methods. Use "HHG" for HHG test, "dCor" for dCOr test, "Mantel" for mantel test, "RV" for RV test and "RI" for Rand index test. |
nperm |
Numer of permutations. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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