makeDend: Recursive partitioning of sequences at a focal point.
In perfectphyloR: Reconstruct Perfect Phylogenies from DNA Sequence Data
Description
Usage
Arguments
Value
Examples
Description
This function recursively partitions a hapMat object with SNVs ordered by ancestry, and records the
partitioning in a phylo object.
Usage
1
makeDend(hapmat, sep = "-")
Arguments
hapmat
A hapMat object with ordered columns according to the ancestry of SNVs.
sep
A separator for haplotype names in the same clade. See the arguments in
reconstructPP
Value
An object of class phylo.
Examples
1
perfectphyloR documentation built on March 8, 2021, 9:06 a.m.
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Description Usage Arguments Value Examples
Description
This function recursively partitions a hapMat object with SNVs ordered by ancestry, and records the
partitioning in a phylo object.
Usage
1 | makeDend(hapmat, sep = "-")
|
Arguments
hapmat |
A hapMat object with ordered columns according to the ancestry of SNVs. |
sep |
A separator for haplotype names in the same clade. See the arguments in
|
Value
An object of class phylo.
Examples
1 |
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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