vcftohapMat: Create a 'hapMat' object from variant call format ('vcf')...
In perfectphyloR: Reconstruct Perfect Phylogenies from DNA Sequence Data
Description
Usage
Arguments
Value
Examples
View source: R/vcf_to_hapMat.R
Description
This function creates a hapMat object from variant call format (vcf) file.
Usage
1
vcftohapMat(vcf_file_path)
Arguments
vcf_file_path
File path to the vcf file.
Value
An object of class hapMat.
Examples
1
2
3
4
5
6
7
## Not run:
# Specify the file path.
vcf_file_path <- "C:/vcfData/vcfData.vcf.gz"
# Create a hapMat object from the vcf file.
ex_vcf_hapMat <- vcftohapMat(vcf_file_path)
## End(Not run)
perfectphyloR documentation built on March 8, 2021, 9:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/vcf_to_hapMat.R
Description
This function creates a hapMat object from variant call format (vcf) file.
Usage
1 | vcftohapMat(vcf_file_path)
|
Arguments
vcf_file_path |
File path to the |
Value
An object of class hapMat.
Examples
1 2 3 4 5 6 7 | ## Not run:
# Specify the file path.
vcf_file_path <- "C:/vcfData/vcfData.vcf.gz"
# Create a hapMat object from the vcf file.
ex_vcf_hapMat <- vcftohapMat(vcf_file_path)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.