result_Gratiot: Result of the fit of Leatherback nest counts

Description Usage Format Details Author(s) References See Also Examples

Description

Result of the fit of Leatherback nest counts from Gratiot et al. (2006) Figure 1 The phenology has been fitted with MinE, MinB, Max, Flat, LengthB, LengthE, Peak, Theta.

Usage

1

Format

A list with Gratiot data and the result of the fit.

Details

Result of the fit of Leatherback nest counts from Gratiot et al. (2006) Figure 1

Author(s)

Marc Girondot marc.girondot@u-psud.fr

References

Gratiot, N., Gratiot, J., de Thoisy, B. & Kelle, L. 2006. Estimation of marine turtles nesting season from incomplete data ; statistical adjustment of a sinusoidal function. Animal Conservation, 9, 95-102.

See Also

Other Phenology model: AutoFitPhenology(), BE_to_LBLE(), Gratiot, LBLE_to_BE(), LBLE_to_L(), L_to_LBLE(), MarineTurtles_2002, MinBMinE_to_Min(), adapt_parameters(), add_SE(), add_phenology(), extract_result(), fit_phenology(), likelihood_phenology(), logLik.phenology(), map_Gratiot, map_phenology(), par_init(), phenology2fitRMU(), phenology_MHmcmc_p(), phenology_MHmcmc(), phenology(), plot.phenologymap(), plot.phenology(), plot_delta(), plot_phi(), print.phenologymap(), print.phenologyout(), print.phenology(), remove_site(), result_Gratiot1, result_Gratiot2, result_Gratiot_Flat, result_Gratiot_mcmc, summary.phenologymap(), summary.phenologyout(), summary.phenology()

Examples

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## Not run: 
library(phenology)
data(Gratiot)
# Generate a formatted list nammed data_Gratiot 
data_Gratiot <- add_phenology(Gratiot, name="Complete", 
		reference=as.Date("2001-01-01"), format="%d/%m/%Y")
# Generate initial points for the optimisation
parg <- par_init(data_Gratiot, fixed.parameters=NULL)
# Run the optimisation
result_Gratiot <- fit_phenology(data=data_Gratiot, 
		fitted.parameters=parg, fixed.parameters=NULL)
# Read a file with result
data(result_Gratiot)

## End(Not run)

phenology documentation built on Oct. 23, 2020, 7:22 p.m.