getProbs.DiscreteDeletor: Get the deletion length probabilities

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Get the deletion length probabilities.

Usage

## S3 method for class 'DiscreteDeletor'
getProbs(this, ...)

Arguments

this	A DiscreteDeletor object.
...	Not used.

Value

A numeric vector with the deletion length probabilities.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see DiscreteDeletor.

Examples

	# create a DiscreteDeletor object
	d<-DiscreteDeletor(rate=1, sizes=1:3)
	# set/get length probabilities
	setProbs(d,c(1/3,1/3,1/3)) # equal probabilites
	getProbs(d)
	# set/get length probabilities via virtual field
	x<-c(2,2,1)
	# normalize x
	x<-x/sum(x)
	d$probs<-x
	d$probs
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.