getProbs.DiscreteInsertor: Get the insertion length probabilities

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Get the insertion length probabilities.

Usage

## S3 method for class 'DiscreteInsertor'
getProbs(this, ...)

Arguments

this	A DiscreteInsertor object.
...	Not used.

Value

A numeric vector with the insertion length probabilities.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see DiscreteInsertor.

Examples

       # create a DiscreteInsertor object
       i<-DiscreteInsertor(rate=1, sizes=1:3)
       # set/get length probabilities
       setProbs(i,c(1/3,1/3,1/3)) # equal probabilites
       getProbs(i)
       # set/get length probabilities via virtual field
       x<-c(2,2,1)
       # normalize x
       x<-x/sum(x)
       i$probs<-x
       i$probs
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.