setDist.ContinuousDeletor: Set the length sampling expression

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Set the length sampling expression.

The length sampling expression can be any valid R expression returning a numeric vector of length one. The value returned by the expression will be rounded.

Usage

## S3 method for class 'ContinuousDeletor'
setDist(this, value, ...)

Arguments

this	A ContinuousDeletor object.
value	An R expression.
...	Not used.

Value

An R expression object.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see ContinuousDeletor.

Examples

	# create object
	o<-ContinuousDeletor(rate=1)
	# set/get length sampling expression
	setDist(o, expression(rnorm(1,mean=3, sd=2)))
	getDist(o)
	# set/get length sampling expression via virtual field
	o$dist<-expression(rnorm(1,mean=6,sd=3))
	o$dist
	# set maxLength
	o$maxLength<-10
	# propose a length
	proposeLength(o)
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.