Files in piglet
Program for Inferring Immunoglobulin Allele Similarity Clusters and Genotypes
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/piglet.R
R/utils-pipe.R
R/allele_cluster.R
R/piglet-package.R
R/Data.R
R/allele_genotype.R
R/utils.R
src/RcppExports.cpp
src/RccpFunctions.cpp
src/RccpAlleleDiff.cpp
inst/CITATION
inst/doc/PIgLET-vignette.html
inst/doc/PIgLET-vignette.R
inst/doc/PIgLET-vignette.Rmd
build/vignette.rds
build/partial.rdb
vignettes/bibliography.bib
vignettes/piglet_logo.svg
vignettes/piglet_logo.png
vignettes/ieee-with-url.csl
vignettes/PIgLET-vignette.Rmd
vignettes/asc_alleles_table.tsv
data/HVGERM.rda
data/allele_threshold_table.rda
data/hv_functionality.rda
data/allele_cluster_table.rda
man/artificialFRW1Germline.Rd
man/allele_diff.Rd
man/piglet-package.Rd
man/allele_cluster_table.Rd
man/recentAlleleClusters.Rd
man/germlineASC.Rd
man/inferAlleleClusters.Rd
man/inferGenotypeAllele.Rd
man/assignAlleleClusters.Rd
man/insert_gaps2_vec.Rd
man/GermlineCluster-class.Rd
man/allele_threshold_table.Rd
man/HVGERM.Rd
man/allele_diff_indices_parallel.Rd
man/allele_diff_indices.Rd
man/ighvClust.Rd
man/allele_diff_strings.Rd
man/ighvDistance.Rd
man/pipe.Rd
man/generateReferenceSet.Rd
man/extractASCTable.Rd
man/alleleClusterNames.Rd
man/zenodoArchive.Rd
man/hv_functionality.Rd
man/piglet.Rd
man/plotAlleleCluster.Rd
man/allele_diff_indices_parallel2.Rd
man/inferGenotypeAllele_asc.Rd
